Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925008.1_cds_XP_016473277.1_65424
CDS Infomation

[gene=LOC107795207] [db_xref=GeneID:107795207] [protein=long chain base biosynthesis protein 1-like] [protein_id=XP_016473277.1] [location=join(82747..82861,83200..83294,84203..84294,85083..85176,85254..85326,85430..85562,85871..86045,86173..86313,86403..86498,86612..86753,86824..86951,87060..87236)] [gbkey=CDS]
Sequence

ATGGATGCAACAATATCAGTTGTTACAAATACGTTGAGAGATGCATCTGATTGGGTGACA
TGGATATCCGAGGCTCCATTTGCAAGAGCTGTGGTGTTTGGAGTTAACATTGGAGGGCAT
CTATTTGTGGAGGGTCTTCTCCTTGTAGTCATCCTTTTCCTACTATCGCAGAAAAGTTAT
AAACCACCTAAAAGACCGTTGACAAAGAAGGAAATAGATGAGCTATGTGATGAATGGGTC
CCAGAACCTCTTATTCCCACCATTACAGATGAGATGAAATCGGAGCCTCCAGTACTTGAA
AGCGCTGCAGGTCCTCATACAACTGTTAATGGCAAGGAAGTAGTAAATTTTACTTCAGCC
AATTACCTCGGATTATTAGGAAATGAAAAGTTACTCGAGACATGCACCAGGGCATTGGAG
AAATATGGAGTAGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTTCACCTT
GATTGTGAGGCCAGGATAGCCAAGTTTCTTGGAACTCCTGATTCTATACTCTACTCTTAT
GGACTTTCTACCATGTTCAGTGCAATTCCAGCATTTTGCAAGAAGGGAGATGTCATTGTT
GCGGATGAAGGTGTGCATTGGGGAATACAAAATGGACTTCAGCTCTCTAGAAGTACAATC
ATATACTTCAAGCACAATGATATGGAGTCCTTGAGAAATACATTGGAGAAAGTCACTCAA
GAAAACAAGCGAGCTAAAAAACTTAGGCGATATATTGTTGTTGAAGCAGTGTATCAGAAT
TCTGGTCAAGTCGCTCCATTGGATGAAATCATCAAACTGAAGGAAAACTACAGATTCCGG
GTATTGTTGGATGAAAGCAATTCCTTGGGTGTGCTTGGCAGTTCCGGTAAAGGTCTAACA
GAACATTACAATGTTCCGGTCGACAAGATAGATATCATTACTGCTTCCATGGGACATGCA
TTGGCCACAGAGGGAGGATTTTGCACCGGGAGTACAAGAGTCATTGAACACCAGCGCCTC
AGTAGTTCTGGTTACGTGTTTTCTGCTTCTCTGCCTCCATATCTAGCAAGTGCTGCAATC
AAAGCTTTTGATATCCTGGAAGTAAATCCTGACCTTATCACAAAATTGAGGGAAAACATT
AAGATACTGTTTAAAGGTCTATCAGATATTAAAGGGCTGGAAATAGCGAGTGATCCACTC
TCTCCCATAGTTTTTCTAAGACTAAACAAGTCCATGGGTTCCACAAACAGTGACCTAAAA
CTGCTAGAAGATATCGCGGATCGTGTATTGAAGGAAGATTCTGTTTTTGTTGTCACTTCA
AAGAGATCGACACTTGATAAATGTAAGTTGCCAGTTGGGCTTCGATTGTTTGTCTCAGCA
GGGCACTCAGAATCTGATATGAAGAAAGCTAGTGAATCGTTGAAGAGAGTCGCAGCTTCA
CTATTGACCGATCAGAGCTAG

Peptide Sequence

PEP ID

XP_016473277.1
PEP Infomation

PREDICTED: long chain base biosynthesis protein 1-like [Nicotiana tabacum]
Sequence

MDATISVVTNTLRDASDWVTWISEAPFARAVVFGVNIGGHLFVEGLLLVVILFLLSQKSY
KPPKRPLTKKEIDELCDEWVPEPLIPTITDEMKSEPPVLESAAGPHTTVNGKEVVNFTSA
NYLGLLGNEKLLETCTRALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY
GLSTMFSAIPAFCKKGDVIVADEGVHWGIQNGLQLSRSTIIYFKHNDMESLRNTLEKVTQ
ENKRAKKLRRYIVVEAVYQNSGQVAPLDEIIKLKENYRFRVLLDESNSLGVLGSSGKGLT
EHYNVPVDKIDIITASMGHALATEGGFCTGSTRVIEHQRLSSSGYVFSASLPPYLASAAI
KAFDILEVNPDLITKLRENIKILFKGLSDIKGLEIASDPLSPIVFLRLNKSMGSTNSDLK
LLEDIADRVLKEDSVFVVTSKRSTLDKCKLPVGLRLFVSAGHSESDMKKASESLKRVAAS
LLTDQS

Transcript Sequence

Gene sequence data has not been registered.